Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922021.1_cds_XP_016470852.1_63257
CDS Infomation

[gene=LOC107793083] [db_xref=GeneID:107793083] [protein=phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like] [protein_id=XP_016470852.1] [location=join(991..1413,3484..3585,3679..3735,3915..3980,14498..14674,14774..14860,14942..15006,15794..15870,16216..16262,16647..16777,18100..18169,18310..18858)] [gbkey=CDS]
Sequence

ATGGACTCAGGATCTGCTGATGTATCAGATTCACAACCTGTTACGGCATCAAATGCAGCA
AGGTCTACTGCAGTGGATTCTGCACCAGGCCAGTCAACAGAGGAGGTGCCTTCAAAGCTC
TCTACTTCAGGCATCTCCTCATGGGCCAAAAATTTAAAAATTCCACAACCGTTCACTGGG
TCCCAAGATGAACAATCATCTGGAAATGCTGCCAAATCAACCTTTGCTCGTTTCACTGGT
GGGTTTGGAATGCGTATGTCCCCTAAGTCTCCTACAGATGAAAATTCTGAAGGAACATCA
ACATCGCCATCCAGTTTTATTGGAACATTCACCAAAGGATTAGTTGACTCTTCGAAGAAT
GCAGTGAAGGCTGTGCAGGTTAAAGCGCGACATGTTGTATCCCAGAATAAGAGAAGATAC
CAGGAAGGAGGATTTGATTTGGATTTGACCTACATAACAGAGAATATAATTGCCATGGGC
TTCCCTGCTGGTGATATGAGCTCTGGCATTTTTGGCTATGTTGAGGGGTTCTACAGAAAC
CACATGGAAGAAGTCATTAAATTCTTTGAAACTCATCATAAGGATAAATACAAAGTGTAC
AATCTTTGTTCTGAAAGATTGTATGATGCTTCTCTGTTTGAGGGAAAGGTTGCTTGTTTT
CCATTTGATGATCACAACTGCCCTCCTATTCAACTTATTATATCGTTTTGTCAAAGTGCA
TACTCATGGTTGAAGGAGGATATCGAAAATGTTGTGGTTGTGCATTGTAAGGCAGGAATG
GCAAGAACTGGTTTGATGATCTCTAGTCTTCTTCTATACTTGAAATTCTTTCCTACGGCG
GAGGAGTCTATGGATTACTACAACCAAAAGAGATGCGTAGACGGAAAAGGACTAGTTTTG
CCGAGCCAGATTAGATATGTCAAGTATTTCGAACGTATCTTAATGTACTTCAATGGAGAA
AACCAGCCTGGCCGCAGGTGCATGCTCAGAGGATTTCGCCTCCATAGGTGCCCTTATTGG
ATAAGACCTTCTATTACAGTATCTGATCATAATGGTGTGCTCTTCTCAACAAAAAAACAT
CCAAGAACCAAGGATCTATCGCCTGAGGATTTTTGGTTCAGTGCACCAAAGAAAGGGGTT
ATGGTTTTTGCTCTTCCAGGTGAGCCTGGCCTTGCAGAGTTAGCTGGGGATTTCAAAATC
CATTTTCATGACGGTCAAGGAGACTTTTATTGTTGGCTGAATACAACAATGATAGAGAAC
AGGAAAGTTCTAACCACAGGCGACCTTGATGGTTTTGACAAGAGAAAATTACCATCACCT
GGTTTTCAAGTGGAAGTAGTCCTTGTGGACTATGATGCTGCCTTCCCTGCTCGACCCCAA
TCAGAAACTGCCACCAAAGAATCAGCTGACAGTTCAAGTGCTAATCCTGCCCCTGGATCC
AATCCTACCTCAGGCGGTGAGCCTGCTGCCAGAAGTAACACGAACCAACACCCTGGGAAC
AGTGACAAGGATGACGTGTTCTCAGACAATGAATCTGAGGAAACTGGAATGTCAAAGACT
AGACAAACTAAAGCTGCTTCTGAAGCTAGTGCTCCTGCAGATGCAAAACCCCTTGGGTCC
AAGAACAATAATGATTCAGATAAATTATCAAGCTTGACACATAAGACAGAGCAAGTCTCG
TTGGGAGGCACAAGCTCTATACACAGCGAGCCTAAAAGAGATGGCTCAGTTGGAGCTACA
TCTGGTGTTGAGGTTTCCAATCCAGTTGGAGGAGTGAGTGATTTCAAGGTAGTTGCAGCT
GATGCATCTGTTTTCTCATTTGGTGATGAAGAGGATTATGAAAGTGAATAA

Peptide Sequence

PEP ID

XP_016470852.1
PEP Infomation

PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like [Nicotiana tabacum]
Sequence

MDSGSADVSDSQPVTASNAARSTAVDSAPGQSTEEVPSKLSTSGISSWAKNLKIPQPFTG
SQDEQSSGNAAKSTFARFTGGFGMRMSPKSPTDENSEGTSTSPSSFIGTFTKGLVDSSKN
AVKAVQVKARHVVSQNKRRYQEGGFDLDLTYITENIIAMGFPAGDMSSGIFGYVEGFYRN
HMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLIISFCQSA
YSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESMDYYNQKRCVDGKGLVL
PSQIRYVKYFERILMYFNGENQPGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLFSTKKH
PRTKDLSPEDFWFSAPKKGVMVFALPGEPGLAELAGDFKIHFHDGQGDFYCWLNTTMIEN
RKVLTTGDLDGFDKRKLPSPGFQVEVVLVDYDAAFPARPQSETATKESADSSSANPAPGS
NPTSGGEPAARSNTNQHPGNSDKDDVFSDNESEETGMSKTRQTKAASEASAPADAKPLGS
KNNNDSDKLSSLTHKTEQVSLGGTSSIHSEPKRDGSVGATSGVEVSNPVGGVSDFKVVAA
DASVFSFGDEEDYESE

Transcript Sequence

Gene sequence data has not been registered.